Plot spatial pie chart of isoforms — plot_spatial_isoform • FLAMES

This function plots a spatial pie chart for given features.

Usage

plot_spatial_isoform(spe, isoforms, assay_type = "counts", color_palette, ...)

Arguments

spe: The SpatialExperiment object.
isoforms: The isoforms to plot.
assay_type: The assay that contains the given features. E.g. 'counts', 'logcounts'.
color_palette: Named vector of colors for each isoform.
...: Additional arguments to pass to plot_spatial_pie, including opacity, grayscale, pie_scale.

Value

A ggplot object.